ABOUT THIS RECORDspecies: Helianthus ciliaris
source: microPC, original name: miR156
Taxonomy by NCBI:
Helianthus ciliaris Helianthus Heliantheae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGACAGAAGAGAGTGAG miRNA* CACTTCTCTTCCGTCA mismatches: 2 bulges: 1 |
pre-miRNA
TGACAGAAGAGAGTGAGTACACGCAGGCAATTGTATAGTGGACTATACTCTTGTTTGAGTTATGCGTGTGCTCACTTCTCTTCCGTCA
dot-bracket secondary structure
.(((.(((((((((((((((((((((((((..((((((....))))))..))))).......))))))))))))).))))))).))).
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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TGACAGAAGAGAGTGAGTACACGCAGGCAATTGTATAGTGGACTATACTCTTGTTTGAGTTATGCGTGTGCTCACTTCTCTTCCGTCA
dot-bracket secondary structure
.(((.(((((((((((((((((((((((((..((((((....))))))..))))).......))))))))))))).))))))).))).
SIMILARITIES| miRBase tcc-MIR156c: 0.00000000002 PMRD cpt-miR156a: 0.000000004 microPC miR156: 0.000000000000001 | UniProt no hits RFAM mir-156: 0.0000000003 |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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