ABOUT THIS RECORDspecies: Triticum aestivum
source: microPC, original name: miR1126
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCCACTATGGACTACTTACGGAG miRNA* TCGTATGTGGTTCATAGTAAA mismatches: 5 bulges: 0 |
pre-miRNA
TCCACTATGGACTACTTACGGAGCAAAATAAATGAATCTACACTCTAAAATGCATCTACATACATTCGTATGTGGTTCATAGTAAA
dot-bracket secondary structure
...((((((((((((.((((((......((.(((..................))).))......)))))).))))))))))))...
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
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TCCACTATGGACTACTTACGGAGCAAAATAAATGAATCTACACTCTAAAATGCATCTACATACATTCGTATGTGGTTCATAGTAAA
dot-bracket secondary structure
...((((((((((((.((((((......((.(((..................))).))......)))))).))))))))))))...
SIMILARITIES| miRBase tae-MIR1126: 2e-41 PMRD tae-miR1126: 2e-41 microPC miR1436: 0.00006 | UniProt no hits RFAM MIR1122: 3e-16 |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
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