ABOUT THIS RECORDspecies: Populus tremula x Populus alba
source: microPC, original name: miR1533
Taxonomy by NCBI:
Populus tremula x Populus alba Populus Saliceae Salicaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ATAATAACAATAATAAT miRNA* TATTGTTGTTGTTGT mismatches: 0 bulges: 0 |
pre-miRNA
ATAATAACAATAATAATAGTAATTATTATTATTGTTGTTGTTGT
dot-bracket secondary structure
((((((((((((((((((((....))))))))))))))))))))
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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ATAATAACAATAATAATAGTAATTATTATTATTGTTGTTGTTGT
dot-bracket secondary structure
((((((((((((((((((((....))))))))))))))))))))
SIMILARITIES| miRBase sja-mir-307: 0.0001 PMRD no hits microPC no hits | UniProt no hits RFAM mir-598: 0.0000001 |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record
