miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

ABOUT THIS RECORD

ID: MNEST044817
species: Brassica oleracea var. alboglabra
source: microPC, original name: miR171

Taxonomy by NCBI:
Brassica oleracea var. alboglabra Brassica oleracea Brassica Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
TTGAGCCGTGCCAATATCA

miRNA*
ATATTGGTACGGTTGAATC

mismatches: 2
bulges: 0

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pre-miRNA
GATATTGGTACGGTTGAATCGAATCAAATCACTCTATCTTTCTCTTGGGTCAGTTGATTTGATTGAGCCGTGCCAATATCA

dot-bracket secondary structure
(((((((((((((((.(((((((((((...((((............))))...))))))))))).))))))))))))))).

UniProt no hits

RFAM MIR171_1: 0.0000003

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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