miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Back to search results
ABOUT THIS RECORD
ID:
MNEST044821
species:
Glycine max
source:
microPC, original name:
miR408
Taxonomy by NCBI:
Glycine max
Glycine
Phaseoleae
Papilionoideae
Fabaceae
Fabales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGCACTGCCTCTTCCCTGGC
miRNA*
TGGGAACAGGCAGGGCACG
mismatches:
2
bulges:
1
View larger
pre-miRNA
GC
TGGGAACAGGCAGGGCACG
AATGGAGCTATCAACAGAAAATGGTAAAGTGAGAATGAAAGGAGAGAGAGAGAGAGAGATCTGTTGTGGCTACGCTCA
T
GCACTGCCTCTTCCCTGGC
dot-bracket secondary structure
((
((((((.((((((.(((.(
(.((.(((((.(((((((.........................................)))))))))))).)).)).
)
)).)))))).))))).)))
SIMILARITIES
miRBase
ahy-MIR408
:
0.00000002
PMRD
gma-miR408a
:
3e-29
microPC
miR408
:
5e-31
UniProt
no hits
RFAM
MIR408: 9e-30
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
download this record