miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



ABOUT THIS RECORD

ID: MNEST044851
species: Eucalyptus globulus
miRNA family: MIR169
source: microPC, original name: miR169

Taxonomy by NCBI:
Eucalyptus globulus Eucalyptus Myrtaceae Myrtales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CAGCCAAGGATGACTTGCCGA

miRNA*
 GGCAAGTTGTTCTTGGCT

mismatches: 3
bulges: 0
View larger
pre-miRNA
 CAGCCAAGGATGACTTGCCGACTCTCTTTCTTCCTATTTATTTGGATTGGATCTATCTCCGTGTATGTTAAATTAATGGAAATAATGAAGTTGGCAAGTT
GTTCTTGGCT

dot-bracket secondary structure
.(((((((((..(((((((((((.((((..((((.(((.((((((..((((......))))......)))))).)))))))..)).))))))))))))).
.)))))))))


SIMILARITIES
miRBase vvi-MIR169g: 0.00000002

PMRD vvi-miR169g: 0.00000002

microPC miR169: 6e-58		UniProt no hits

RFAM MIR169_2: 0.0000004

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record




Liczniki na strone;