ABOUT THIS RECORDspecies: Glycine max
miRNA family: MIR408
source: microPC, original name: miR408
Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGCACTGCCTCTTCCCTGGCT miRNA* CTGGGAACAGGCAGGGCACG mismatches: 2 bulges: 1 |
pre-miRNA
GGCTGGGAACAGGCAGGGCACGAATGGAGCTATCAACAGAAAATGGTAAAGTGAGAATGAAAGGAGAGAGAGAGAGAGAGATCTGTTGTGGCTACGCTCA
TGCACTGCCTCTTCCCTGGCT
dot-bracket secondary structure
(((((((((.((((((.(((.((.((.(((((.(((((((.........................................)))))))))))).)).)).
))).)))))).))))).))))
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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GGCTGGGAACAGGCAGGGCACGAATGGAGCTATCAACAGAAAATGGTAAAGTGAGAATGAAAGGAGAGAGAGAGAGAGAGATCTGTTGTGGCTACGCTCA
TGCACTGCCTCTTCCCTGGCT
dot-bracket secondary structure
(((((((((.((((((.(((.((.((.(((((.(((((((.........................................)))))))))))).)).)).
))).)))))).))))).))))
SIMILARITIES| miRBase ahy-MIR408: 0.000000006 PMRD gma-miR408a: 3e-29 microPC miR408: 5e-31 | UniProt no hits RFAM MIR408: 6e-31 |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record
