ABOUT THIS RECORDspecies: Triticum aestivum
miRNA family: MIR1439
source: microPC, original name: miR1439
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTTTGGAACGGAGGGAGTAT miRNA* ACTCCCTCTGTTTCAAAATA mismatches: 1 bulges: 0 |
pre-miRNA
TACTCCCTCTGTTTCAAAATAGATGACCCAACTTTGTACTACCTCCATTTACAAAGTTGAGTCACCTATTTTGGAACGGAGGGAGTAT
dot-bracket secondary structure
((((((((((((((((((((((.((((.((((((((((...........)))))))))).)))).)))))))))))))))))))))).
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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TACTCCCTCTGTTTCAAAATAGATGACCCAACTTTGTACTACCTCCATTTACAAAGTTGAGTCACCTATTTTGGAACGGAGGGAGTAT
dot-bracket secondary structure
((((((((((((((((((((((.((((.((((((((((...........)))))))))).)))).)))))))))))))))))))))).
SIMILARITIES| miRBase tae-MIR1137: 0.00000000007 PMRD tae-miR1137: 0.00000000007 microPC miR1439: 7e-45 | UniProt no hits RFAM MIR1122: 0.00000000000002 |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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