miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Back to search results
ABOUT THIS RECORD
ID:
MNEST044875
species:
Prunus persica
miRNA family:
MIR396
source:
microPC, original name:
miR396
Taxonomy by NCBI:
Prunus persica
Prunus
Amygdaleae
Spiraeoideae
Rosaceae
Rosales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTCCACAGCTTTCTTGAACT
miRNA*
GTCAATAAAGCTGTGGGA
mismatches:
2
bulges:
0
View larger
pre-miRNA
TTCCACAGCTTTCTTGAACT
GCATCCATGAGATCGATCGATCTTTGCATGTGAGGCTGCAGTCACTCACTCACTCTCTCTCTAACTGGCTTGCGG
GTCAA
TAAAGCTGTGGGA
dot-bracket secondary structure
((((((((((((.((((.((
(((.(((.((((((....)))))).....(((((..........)))))................)))..)))))
.))))
.))))))))))))
SIMILARITIES
miRBase
mtr-MIR396b
:
0.00000002
PMRD
gcl-miR396a
:
0.000000006
microPC
miR396
:
1e-59
UniProt
no hits
RFAM
MIR396: 0.0000004
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
download this record