ABOUT THIS RECORDspecies: Vigna unguiculata
miRNA family: MIR169
source: microPC, original name: miR169
Taxonomy by NCBI:
Vigna unguiculata Vigna Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CAGCCAAGGATGACTTGCCGG miRNA* GGCAAGTGGTTCTTGGCT mismatches: 2 bulges: 0 |
pre-miRNA
CAGCCAAGGATGACTTGCCGGCGTTATGCTGCATGATGCTTTTTACGGCGACTTTGCCGGCAAGTGGTTCTTGGCT
dot-bracket secondary structure
.((((((((((.(((((((((((...(((((...((....))...)))))....))))))))))).))))))))))
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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CAGCCAAGGATGACTTGCCGGCGTTATGCTGCATGATGCTTTTTACGGCGACTTTGCCGGCAAGTGGTTCTTGGCT
dot-bracket secondary structure
.((((((((((.(((((((((((...(((((...((....))...)))))....))))))))))).))))))))))
SIMILARITIES| miRBase gma-MIR169a: 0.00000001 PMRD gma-miR169a: 0.00000001 microPC miR169: 8e-38 | UniProt no hits RFAM MIR169_2: 0.000004 |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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