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ABOUT THIS RECORD
ID:
MNEST044904
species:
Oryza sativa
source:
microPC, original name:
miR1862
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ACTAGGTTGCTATATTTTGGGACG
miRNA*
TCCTAAAATATAGCAACCTAGTAT
mismatches:
1
bulges:
0
View larger
pre-miRNA
TG
TCCTAAAATATAGCAACCTAGTAT
GTCCACATTCGTTATACTAGGATATGTCCCATCCAAGT
ACTAGGTTGCTATATTTTGGGACG
dot-bracket secondary structure
.(
((((((((((((((((((((((((
....((....)).......((((.......))))..))
))))))))))))))))))))))).
SIMILARITIES
miRBase
osa-MIR818a
:
0.00002
PMRD
osa-miRf11780-akr
:
0.0000000000003
microPC
no hits
UniProt
no hits
RFAM
MIR1122: 4e-34
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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