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ABOUT THIS RECORD
ID:
MNEST044913
species:
Ricinus communis
source:
microPC, original name:
miR319
Taxonomy by NCBI:
Ricinus communis
Ricinus
Acalypheae
Acalyphoideae
Euphorbiaceae
Malpighiales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTGGATTGAAGGGAGCTC
miRNA*
GCTCCTTGAAGTCCAATA
mismatches:
2
bulges:
0
View larger
pre-miRNA
GA
GCTCCTTGAAGTCCAATA
GAGGATCTTGATGGGTAGATTGAGCTGCTGAGCTATGGATCCCACAGCCCTATAAGCAGAGATTATAATTTTGGATAGGC
TTGTGGCTTGCATATCTCAGGAGCTTCATTACCTTGTATTAGATCCTTGT
TTGGATTGAAGGGAGCTC
dot-bracket secondary structure
((
(((((((..(((((((..
((((((((....((((((...(((((.(((((.((((.(..((((((.(((((...(((((.......))))).))))).
))))))..).)))).))))).)))))..))))))......))))))))..
)))))))..)))))))))
SIMILARITIES
miRBase
rco-MIR159
:
2e-92
PMRD
ptc-miR159b
:
7e-28
microPC
miR159
:
2e-92
UniProt
no hits
RFAM
MIR159: 5e-91
Identical with:
miR159
from microPC (
MNEST045296
)
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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