ABOUT THIS RECORDspecies: Euphorbia esula
miRNA family: MIR169
source: microPC, original name: miR169
Taxonomy by NCBI:
Euphorbia esula Euphorbia Euphorbieae Euphorbioideae Euphorbiaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GAGCCAAGGATGACTTGCCGC miRNA* GGCAAGTCTCCTTGGTTC mismatches: 0 bulges: 1 |
pre-miRNA
GAGCCAAGGATGACTTGCCGCGCATTATGTATATATTTATTTTTATATATATGTCATCATTAAGAATTTATATATTGTATTGTTGGTGTGGCAAGTCTCC
TTGGTTC
dot-bracket secondary structure
((((((((((.((((((((((((..((((((((((........))))))))))...((.....))....................)))))))))))))))
)))))))
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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GAGCCAAGGATGACTTGCCGCGCATTATGTATATATTTATTTTTATATATATGTCATCATTAAGAATTTATATATTGTATTGTTGGTGTGGCAAGTCTCC
TTGGTTC
dot-bracket secondary structure
((((((((((.((((((((((((..((((((((((........))))))))))...((.....))....................)))))))))))))))
)))))))
SIMILARITIES| miRBase rco-MIR169c: 0.000005 PMRD vvi-miR169o: 0.00008 microPC miR169: 0.00000008 | UniProt no hits RFAM MIR169_2: 0.00009 |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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