ABOUT THIS RECORDspecies: Triticum aestivum
miRNA family: MIR1436
source: microPC, original name: miR1436
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ACATTATGGGACGGAGGGAGT miRNA* TCCCTCCGTTCCATAATGTAA mismatches: 0 bulges: 0 |
pre-miRNA
ACTCCCTCCGTTCCATAATGTAAGACGTTTTTTGACAAAAAACGTCTTACATTATGGGACGGAGGGAGT
dot-bracket secondary structure
((((((((((((((((((((((((((((((((.....))))))))))))))))))))))))))))))))
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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ACTCCCTCCGTTCCATAATGTAAGACGTTTTTTGACAAAAAACGTCTTACATTATGGGACGGAGGGAGT
dot-bracket secondary structure
((((((((((((((((((((((((((((((((.....))))))))))))))))))))))))))))))))
SIMILARITIES| miRBase tae-MIR1130: 0.00000001 PMRD tae-miR1130: 0.00000001 microPC miR1436: 1e-33 | UniProt no hits RFAM MIR1122: 0.00000000001 |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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