ABOUT THIS RECORDspecies: Phaseolus coccineus
miRNA family: MIR167
source: microPC, original name: miR167
Taxonomy by NCBI:
Phaseolus coccineus Phaseolus Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGAAGCTGCCAGCATGATCTT miRNA* GATCATGTGGCAGTTTCA mismatches: 2 bulges: 1 |
pre-miRNA
TGAAGCTGCCAGCATGATCTTAACTTCCCTCACTTGGTTGAGGAGAGATCAGATCATGTGGCAGTTTCA
dot-bracket secondary structure
.((((((((((.((((((((...((..(((((......)))))..))...)))))))))))))))))).
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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TGAAGCTGCCAGCATGATCTTAACTTCCCTCACTTGGTTGAGGAGAGATCAGATCATGTGGCAGTTTCA
dot-bracket secondary structure
.((((((((((.((((((((...((..(((((......)))))..))...)))))))))))))))))).
SIMILARITIES| miRBase gma-MIR167f: 9e-22 PMRD pco-miR167: 1e-33 microPC miR167: 1e-33 | UniProt no hits RFAM MIR167_1: 0.000000000000001 |
Identical with: pco-miR167 from PMRD (MNEST051324) |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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