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ABOUT THIS RECORD

ID: MNEST044973
species: Ipomoea nil
source: microPC, original name: miR159

Taxonomy by NCBI:
Ipomoea nil Ipomoea Ipomoeeae Convolvulaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CTTGGACTGAAGGGAGCTC

miRNA*
 GCTTTCTTCAGTCCAAACA

mismatches: 3
bulges: 0
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pre-miRNA
 GAGCTTTCTTCAGTCCAAACATGGGTGGCAGTAGGATTCAATTAGCTTCCGACTCATTCATCCAAATGCTGAGATGAGATGACGATGAACCCGGCCTTGA
TGACTAATGAACACTGTCTCAGTAACTGAGTGAATGATGCGGGAGACAAGTTGGATCTTAAGCTTCCTGTACTTGGACTGAAGGGAGCTC

dot-bracket secondary structure
(((((..(((((((((((..(((((.(((..((((((((((((.(((((((..(((((((..((..(((((((((.((....((.......))...((.(
(.....)).))..)))))))))))..))..)))))))..)))))).).)))))))))))).))).)))))..)))))))))))..)))))


SIMILARITIES
miRBase rco-MIR319a: 3e-27

PMRD ptc-miR319a: 8e-25

microPC miR319: 2e-105		UniProt no hits

RFAM MIR159: 6e-26

Identical with: miR319 from microPC (MNEST046587)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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