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ABOUT THIS RECORD
ID:
MNEST044975
species:
Brassica oleracea var. alboglabra
source:
microPC, original name:
miR171
Taxonomy by NCBI:
Brassica oleracea var. alboglabra
Brassica oleracea
Brassica
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGATTGAGCCGTGCCAATAT
miRNA*
ATTGGTACGGTTGAATCGAA
mismatches:
1
bulges:
0
View larger
pre-miRNA
AT
ATTGGTACGGTTGAATCGAA
TCAAATCACTCTATCTTTCTCTTGGGTCAGTTGATT
TGATTGAGCCGTGCCAATAT
dot-bracket secondary structure
((
((((((((((((.(((((((
((((...((((............))))...))))))
))))).))))))))))))))
SIMILARITIES
miRBase
ptc-MIR171i
:
0.00000006
PMRD
ptc-miR171i
:
0.00000006
microPC
miR171
:
5e-39
UniProt
no hits
RFAM
MIR171_1: 0.000001
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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