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ABOUT THIS RECORD

ID: MNEST044986
species: Mesembryanthemum crystallinum
miRNA family: MIR396
source: microPC, original name: miR396

Taxonomy by NCBI:
Mesembryanthemum crystallinum Mesembryanthemum Aizoaceae Caryophyllales core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTCCACAGCTTTCTTGAACTG

miRNA*
 GTTCAATAAAGCTGTGGGA

mismatches: 1
bulges: 0
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pre-miRNA
 TTCCACAGCTTTCTTGAACTGCATCTTCCCTAATTTTTTTATCTTTTGTTTTTCCTCTCTCAGATCCAATTTTTTCTTTGGTAAATACTTATAATTTATC
AAAAAAAAAAAAAGATGGATTTTTGGGAATTGAAAGATGGAAAATTTTAATTTGTGGGTTGCGGTTCAATAAAGCTGTGGGA

dot-bracket secondary structure
((((((((((((.((((((((((....(((.(((((((((((((((((...(((((.....(((((((.((((((.((((((((((.......)))))))
))).)))))).....)))))))..))))).))))))))))))).....))))...))).)))))))))).))))))))))))


SIMILARITIES
miRBase osa-MIR396b: 0.00000004

PMRD osa-miR396b: 0.00000004

microPC miR396: 3e-33		UniProt no hits

RFAM MIR396: 0.0000007

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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