ABOUT THIS RECORDspecies: Vigna unguiculata
source: microPC, original name: miR156
Taxonomy by NCBI:
Vigna unguiculata Vigna Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CAGAAGAGAGTGAGCAC miRNA* GCTCACTACTCTTTCTG mismatches: 0 bulges: 2 |
pre-miRNA
CAGAAGAGAGTGAGCACAAAGAGGCACATGATATAACTCTATATCACTGCTTTTGTGTGCTCACTACTCTTTCTG
dot-bracket secondary structure
((((((((((((((((((.(((((((..(((((((....))))))).))))))).)))))))))).))).)))))
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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CAGAAGAGAGTGAGCACAAAGAGGCACATGATATAACTCTATATCACTGCTTTTGTGTGCTCACTACTCTTTCTG
dot-bracket secondary structure
((((((((((((((((((.(((((((..(((((((....))))))).))))))).)))))))))).))).)))))
SIMILARITIES| miRBase tcc-MIR156g: 0.00000000006 PMRD ptc-miR156c: 0.000000004 microPC miR156: 3e-37 | UniProt no hits RFAM mir-156: 0.000000001 |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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