ABOUT THIS RECORDspecies: Bruguiera gymnorhiza
source: microPC, original name: miR156
Taxonomy by NCBI:
Bruguiera gymnorhiza Bruguiera Rhizophoraceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CAGAAGATAGAGAGCACA miRNA* TGCTCTCTATGCTTCTG mismatches: 0 bulges: 1 |
pre-miRNA
CAGAAGATAGAGAGCACAGATGATGATGTGCAATTTTTGGATTCTGCATCTCACTCCTTTGTGCTCTCTATGCTTCTG
dot-bracket secondary structure
((((((((((((((((((((.(((((.(((((............))))).))).)).)))))))))))))).))))))
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record
CAGAAGATAGAGAGCACAGATGATGATGTGCAATTTTTGGATTCTGCATCTCACTCCTTTGTGCTCTCTATGCTTCTG
dot-bracket secondary structure
((((((((((((((((((((.(((((.(((((............))))).))).)).)))))))))))))).))))))
SIMILARITIES| miRBase rco-MIR156h: 7e-23 PMRD ptc-miRf10223-akr: 1e-21 microPC miR157: 5e-39 | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record
