miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST045004
species: Bruguiera gymnorhiza
source: microPC, original name: miR156

Taxonomy by NCBI:
Bruguiera gymnorhiza Bruguiera Rhizophoraceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CAGAAGATAGAGAGCACA

miRNA*
TGCTCTCTATGCTTCTG

mismatches: 0
bulges: 1

View larger
pre-miRNA
CAGAAGATAGAGAGCACAGATGATGATGTGCAATTTTTGGATTCTGCATCTCACTCCTTTGTGCTCTCTATGCTTCTG

dot-bracket secondary structure
((((((((((((((((((((.(((((.(((((............))))).))).)).)))))))))))))).))))))


SIMILARITIES
miRBase rco-MIR156h: 7e-23

PMRD ptc-miRf10223-akr: 1e-21

microPC miR157: 5e-39
UniProt no hits

RFAM no hits

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record





Liczniki na strone;