miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

ABOUT THIS RECORD

ID: MNEST045028
species: Manihot esculenta
source: microPC, original name: miR399

Taxonomy by NCBI:
Manihot esculenta Manihot Manihoteae Crotonoideae Euphorbiaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
TGCCAAAGGAGAATTGCCCT

miRNA*
TGCGATTCTCCTTTGGCAGG

mismatches: 1
bulges: 0

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pre-miRNA
AGTGCGATTCTCCTTTGGCAGGAATTTGGTATTCTGCTGTTAACCAGTCTGCTAAACTGATAGCTGCCAAAGGAGAATTGCCCT

dot-bracket secondary structure
((.((((((((((((((((((...(((((((..(((........)))..))))))).......)))))))))))))))))).))

UniProt no hits

RFAM no hits

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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