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ABOUT THIS RECORD

ID: MNEST045037
species: Cycas rumphii
miRNA family: MIR166
source: microPC, original name: miR166

Taxonomy by NCBI:
Cycas rumphii Cycas Cycadaceae Cycadales Cycadopsida Cycadophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCGGACCAGGCTTCATTCC

miRNA*
 AATGTTGTCTGGCTCGACT

mismatches: 4
bulges: 0
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pre-miRNA
 GGAATGTTGTCTGGCTCGACTCGATCCACAGACTTTTGGTTGGAGGGTGCTGTCGGACCAGGCTTCATTCC

dot-bracket secondary structure
((((((..((((((..((((...((((.(.(((.....))).).))))...))))..))))))..))))))


SIMILARITIES
miRBase vvi-MIR166b: 0.00005

PMRD vvi-miR166b: 0.00005

microPC miR166: 7e-35		UniProt no hits

RFAM mir-166: 0.0009

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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