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ABOUT THIS RECORD
ID:
MNEST045038
species:
Nicotiana tabacum
source:
microPC, original name:
miR160
Taxonomy by NCBI:
Nicotiana tabacum
Nicotiana
Nicotianeae
Nicotianoideae
Solanaceae
Solanales
lamiids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GCCTGGCTCCCTGCATGCC
miRNA*
CGTGCGAGGAGCCAAGC
mismatches:
2
bulges:
0
View larger
pre-miRNA
GCCTGGCTCCCTGCATGCC
ACACGCTTTCACCAATCCGCGGGTTCTTTGATTGGCTGATCAGTGGGTGG
CGTGCGAGGAGCCAAGC
dot-bracket secondary structure
((.(((((((.((((((((
((.((((.(((((((((............)))))).)))..)))).))))
)))))).))))))).))
SIMILARITIES
miRBase
vvi-MIR160c
:
0.000004
PMRD
vvi-miR160c
:
0.000004
microPC
miR160
:
1e-43
UniProt
no hits
RFAM
mir-160: 0.00007
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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