ABOUT THIS RECORDspecies: Cucumis sativus
miRNA family: MIR166
source: microPC, original name: miR166
SEQUENCE & STRUCTURE| miRNA TCGGACCAGGCTTCATTCC miRNA* AATGTTGTCTGGCTCGAGG mismatches: 4 bulges: 0 |
pre-miRNA
GGAATGTTGTCTGGCTCGAGGTCACTTTTTTTTCTTCTCAAAAATCAATTCCATCTTTTATATATTTTGGTTTTAATTTCAAACAAATTTCGACGATCGA
CGAATTGATTCATTCAAAACCAAAGTGTCGTCGGACCAGGCTTCATTCC
dot-bracket secondary structure
((((((..((((((..(((.(.((((((..............(((((((((..............(((((........)))))......(((.....)))
.)))))))))...........)))))).).)))..))))))..))))))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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GGAATGTTGTCTGGCTCGAGGTCACTTTTTTTTCTTCTCAAAAATCAATTCCATCTTTTATATATTTTGGTTTTAATTTCAAACAAATTTCGACGATCGA
CGAATTGATTCATTCAAAACCAAAGTGTCGTCGGACCAGGCTTCATTCC
dot-bracket secondary structure
((((((..((((((..(((.(.((((((..............(((((((((..............(((((........)))))......(((.....)))
.)))))))))...........)))))).).)))..))))))..))))))
SIMILARITIES| miRBase ghr-MIR166b: 0.0000001 PMRD ghr-miR166b: 0.0000001 microPC miR166: 1e-66 | UniProt no hits RFAM mir-166: 0.000002 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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