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ABOUT THIS RECORD
ID:
MNEST045068
species:
Zea mays
source:
microPC, original name:
miR171
Taxonomy by NCBI:
Zea mays
Zea
Andropogoneae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTGAGCCGTGCCAATATCAC
miRNA*
GATGTTGGCATGGCTCAATC
mismatches:
2
bulges:
0
View larger
pre-miRNA
GC
GATGTTGGCATGGCTCAATC
AACTCGCCGGCCGCGGGTGGCTTATAGCTTAATTCTGCGCATTCGATCGAGGTGCGGGCGCAGTGTTTAATTGA
TTGA
GCCGTGCCAATATCAC
dot-bracket secondary structure
..
((((((((((((((((((((
((((((((.((((((((.(((.....)))....))))))..(((....)))..)).)))).))).......)))
))))
))))))))))))))..
SIMILARITIES
miRBase
zma-MIR171f
:
2e-61
PMRD
zma-miR171f
:
2e-61
microPC
miR171
:
2e-61
UniProt
no hits
RFAM
MIR171_1: 3e-60
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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