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ABOUT THIS RECORD
ID:
MNEST045102
species:
Vitis vinifera
source:
microPC, original name:
miR319
Taxonomy by NCBI:
Vitis vinifera
Vitis
Vitaceae
Vitales
rosids incertae sedis
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTGGATTGAAGGGAGCTC
miRNA*
GCTCCTTGAAGTCCAATA
mismatches:
2
bulges:
0
View larger
pre-miRNA
GA
GCTCCTTGAAGTCCAATA
GAGGGTCTTACTGGGTAGATTGAGCTGCTGACTTATGGATCCCACAGCCCTATCCCGTCAATGGGGGGCATTGGATAGGC
TTGTGGCTTGCATATCTCAAGAGCTGCATTATCCAAGTTTAGATCCTTGT
TTGGATTGAAGGGAGCTC
dot-bracket secondary structure
((
(((((((..(((((((..
((((((((.(((((((((..((((((..(((..((((.(..((((((.(((((((.(((.......)))...))))))).
))))))..).))))..)))..)))).)))))))).)))..))))))))..
)))))))..)))))))))
SIMILARITIES
miRBase
vvi-MIR159c
:
6e-90
PMRD
vvi-miR159c
:
6e-90
microPC
miR159
:
2e-92
UniProt
no hits
RFAM
MIR159: 1e-88
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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