miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

ABOUT THIS RECORD

ID: MNEST045123
species: Carica papaya
source: microPC, original name: miR390

Taxonomy by NCBI:
Carica papaya Carica Caricaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
CGCTATCCATCCTGAGTTTC

miRNA*
AGCTCAGGAGGGATAGCGCC

mismatches: 2
bulges: 0

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pre-miRNA
AAGCTCAGGAGGGATAGCGCCATGGCGGGTCTTGAATCTTGATCTTCATTTGCGCTATCCATCCTGAGTTTC

dot-bracket secondary structure
((((((((((.(((((((((.((((.(((((.........)))))))))..))))))))).)))))))))).

UniProt no hits

RFAM MIR390: 3e-34

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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