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ABOUT THIS RECORD

ID: MNEST045142
species: Populus trichocarpa x Populus deltoides
miRNA family: MIR1447
source: microPC, original name: miR1447

Taxonomy by NCBI:
Populus trichocarpa x Populus deltoides Populus Saliceae Salicaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CAGAATTGCAGTGCCTTGATT

miRNA*
 TCAGGGCACTGCAATTCTAAA

mismatches: 1
bulges: 0
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pre-miRNA
 AATCAGGGCACTGCAATTCTAAATGTCTGTTGGCAAGTGGCGATGCCAGACGTTTGAAATTTACATCATTTATTAGTCAGAATTGCAGTGCCTTGATT

dot-bracket secondary structure
((((((((((((((((((((.(((((((...((((........)))))))))))(((........)))..........))))))))))))))))))))


SIMILARITIES
miRBase ptc-MIR1447: 2e-45

PMRD ptc-miRf11238-akr: 2e-45

microPC miR1447: 2e-27		UniProt no hits

RFAM no hits

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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