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ABOUT THIS RECORD
ID:
MNEST045146
species:
Panicum virgatum
miRNA family:
MIR156
source:
microPC, original name:
miR156
Taxonomy by NCBI:
Panicum virgatum
Panicum
Paniceae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGACAGAAGAGAGTGAGCAC
miRNA*
GCTCACTCTCTATCTGTCA
mismatches:
1
bulges:
1
View larger
pre-miRNA
TGACAGAAGAGAGTGAGCAC
ACATGGTGGTTTCTTAGCATGAGTGCCATGCTGGGAGCTGTGCGT
GCTCACTCTCTATCTGTCA
dot-bracket secondary structure
.(((((((((((((((((((
.((((((....((((((((((.....)))))))))))))))).))
))))))))))).)))))).
SIMILARITIES
miRBase
ssp-MIR156
:
2e-38
PMRD
sbi-miR156b
:
9e-38
microPC
miR156
:
2e-42
UniProt
no hits
RFAM
mir-156: 2e-36
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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