ABOUT THIS RECORDspecies: Arachis hypogaea
source: microPC, original name: miR156
Taxonomy by NCBI:
Arachis hypogaea Arachis Dalbergieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CAGAAGAGAGAGAGCACAAC miRNA* GTGTGCTCTCTACTCTTCTG mismatches: 1 bulges: 1 |
pre-miRNA
CAGAAGAGAGAGAGCACAACCCGAGAAATGGTCAAAGAATCTTTTACCTTTGTTGGGAGTGTGCTCTCTACTCTTCTG
dot-bracket secondary structure
((((((((((((((((((.(((((.(((.(((.((((...)))).)))))).)))))..)))))))))).))))))))
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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CAGAAGAGAGAGAGCACAACCCGAGAAATGGTCAAAGAATCTTTTACCTTTGTTGGGAGTGTGCTCTCTACTCTTCTG
dot-bracket secondary structure
((((((((((((((((((.(((((.(((.(((.((((...)))).)))))).)))))..)))))))))).))))))))
SIMILARITIES| miRBase ahy-MIR156c: 5e-39 PMRD ahy-miR157k: 5e-39 microPC miR156: 5e-39 | UniProt no hits RFAM mir-156: 0.000000004 |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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