miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Back to search results
ABOUT THIS RECORD
ID:
MNEST045159
species:
Gossypium hirsutum
source:
microPC, original name:
miR482
Taxonomy by NCBI:
Gossypium hirsutum
Gossypium
Malvoideae
Malvaceae
Malvales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCTTGCCTACTCCACCCAT
miRNA*
GGGTGAGGGGGTAAGACA
mismatches:
2
bulges:
1
View larger
pre-miRNA
AT
GGGTGAGGGGGTAAGACA
ATGGACTGTTTCAGTCTTTTGGAAACAGAAATAAAGAAGAAGGCTGGTTTATG
TCTTGCCTACTCCACCCAT
dot-bracket secondary structure
((
(((((((..(((((((((
.(((((.....((((((((((....))...........)))))))))))))))
)))))))..)).)))))))
SIMILARITIES
miRBase
ghr-MIR482b
:
3e-47
PMRD
ghr-miR472
:
3e-47
microPC
no hits
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
download this record