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ABOUT THIS RECORD
ID:
MNEST045163
species:
Lactuca saligna
source:
microPC, original name:
miR398
Taxonomy by NCBI:
Lactuca saligna
Lactuca
Lactucinae
Cichorieae
Cichorioideae
Asteraceae
Asterales
campanulids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GTGTTCTCAGGTCGCCCCT
miRNA*
GTGCGATATGAGAACACAT
mismatches:
2
bulges:
0
View larger
pre-miRNA
AG
GTGCGATATGAGAACACAT
GTTAAATGTGCAACAAATCACATTCCGCCAC
GTGTTCTCAGGTCGCCCCT
dot-bracket secondary structure
((
(.(((((.(((((((((..
((..((((((........))))))..))...
))))))))).))))).)))
SIMILARITIES
miRBase
bdi-MIR398c
:
0.0002
PMRD
vvi-miR398c
:
0.0008
microPC
miR398
:
7e-35
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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