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ABOUT THIS RECORD
ID:
MNEST045174
species:
Oryza sativa
source:
microPC, original name:
miR171
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GAGCCGAACCAATATCACTC
miRNA*
TTGGTATTGTTTCGGCTCAT
mismatches:
4
bulges:
0
View larger
pre-miRNA
GGT
TTGGTATTGTTTCGGCTCAT
GTCGTTCACACAGATGT
GAGCCGAACCAATATCACTC
dot-bracket secondary structure
...
.((((((((.((((((((((
(((.........)))))
)))))))).))))))))...
SIMILARITIES
miRBase
osa-MIR171h
:
2e-28
PMRD
osa-miR171h
:
2e-28
microPC
miR171
:
3e-27
UniProt
no hits
RFAM
MIR171_2: 4e-27
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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