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ABOUT THIS RECORD

ID: MNEST045206
species: Cichorium intybus
source: microPC, original name: miR167

Taxonomy by NCBI:
Cichorium intybus Cichorium Cichoriinae Cichorieae Cichorioideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 AAGCTGCCAGCATGATCT

miRNA*
 GTCATCCTTGCAGCTT

mismatches: 2
bulges: 0
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pre-miRNA
 AAGCTGCCAGCATGATCTGGTGATGCCAAACTGGGTGGCCTGTGTATGTTTGTCCATATATGAGTGGATAATGTAAAAGTTCTATATATAGTCAAATGTC
TTTGTGTGTGTTTTTGGTGATGTGTTGGTATCTGTTCATGGGTAGAGTAAGGAGAGGTTAACCAGGTCATCCTTGCAGCTT

dot-bracket secondary structure
(((((((.((.((((((((((...(((...((.....(((((((.....((((((((......))))))))......((.((.((((((..(((((...(
.......)....)))))..)))))).))...))...)))))))......))....)))..)))))))))).)).)))))))


SIMILARITIES
miRBase vvi-MIR167a: 0.000009

PMRD vvi-miR167a: 0.000009

microPC miR167: 5e-100		UniProt no hits

RFAM MIR167_1: 0.0002

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
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