ABOUT THIS RECORDspecies: Hordeum vulgare
miRNA family: MIR1436
source: microPC, original name: miR1436
Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ACATTTTGGGACGGAGGGAGT miRNA* TCCCTCCGTCCTAAAATGTAA mismatches: 0 bulges: 0 |
pre-miRNA
ACTCCCTCCGTCCTAAAATGTAAGACGTTTTTTACATTTTGGGACGGAGGGAGT
dot-bracket secondary structure
(((((((((((((((((((((((((....)))))))))))))))))))))))))
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record
ACTCCCTCCGTCCTAAAATGTAAGACGTTTTTTACATTTTGGGACGGAGGGAGT
dot-bracket secondary structure
(((((((((((((((((((((((((....)))))))))))))))))))))))))
SIMILARITIES| miRBase tae-MIR1130: 0.0005 PMRD osa-miRf10322-akr: 0.0001 microPC miR1436: 0.0000001 | UniProt no hits RFAM MIR1122: 0.000002 |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record
