miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST045224
species: Manihot esculenta
source: microPC, original name: miR1533

Taxonomy by NCBI:
Manihot esculenta Manihot Manihoteae Crotonoideae Euphorbiaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ATAATAAAAATAATAAT

miRNA*
 TATTGCTTTTGTTGTTA

mismatches: 3
bulges: 0
View larger
pre-miRNA
 TATTGCTTTTGTTGTTACAATTTCTGTTGTGGAAAATGTGCTCCAGATGAACAGGATGATCTCGGAGATCCTTTAACCGAGAGAATGGATCTTGAAACTG
GAGATCCCCCTGAAAACTTAATCATTACACAACCTTGTGATGCCAATGCATCCAAAGCTTCCTATGGAACAATAGAATAATAATAAAAATAATAAT

dot-bracket secondary structure
(((((.(((((((((((....(((((((((.........(((...((((..((((....((((((...........))))))....(((((((.......
))))))).))))..........(((((((......)))))))......))))...)))..........)))))))))))))))))))).)))))..


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record




Liczniki na strone;