miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

ABOUT THIS RECORD

ID: MNEST045230
species: Saccharum officinarum
miRNA family: MIR444
source: microPC, original name: miR444

Taxonomy by NCBI:
Saccharum officinarum Saccharum officinarum complex Saccharum Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
TGCAGTTGTTGTCTCAAGCTT

miRNA*
GCTAGAGGCAGCAACTGCATA

mismatches: 1
bulges: 0

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pre-miRNA
AAGCTAGAGGCAGCAACTGCATATCTTGCAAGAAAATTGGTTTTCGAACCATACCGATAATTTTCTTGCANGTTGTGCAGTTGTTGTCTCAAGCTT

dot-bracket secondary structure
(((((.(((((((((((((((((...(((((((((((((....(((........))))))))))))))))...))))))))))))))))).)))))

UniProt no hits

RFAM MIR444: 5e-46

MORE

miRNEST target predictions
non-miRNEST targets: none
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