ABOUT THIS RECORDspecies: Festuca arundinacea
source: microPC, original name: miR1122
Taxonomy by NCBI:
Festuca arundinacea Festuca Loliinae Poeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TAGATACCTCCGTATCTAGA miRNA* TAGATGTGGATGTATCTGGA mismatches: 1 bulges: 0 |
pre-miRNA
TCTAGATGTGGATGTATCTGGATGTATTTTAGTTATAGATACCTCCGTATCTAGA
dot-bracket secondary structure
((((((((((((.((((((((((........))).))))))).))))))))))))
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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TCTAGATGTGGATGTATCTGGATGTATTTTAGTTATAGATACCTCCGTATCTAGA
dot-bracket secondary structure
((((((((((((.((((((((((........))).))))))).))))))))))))
SIMILARITIES| miRBase tae-MIR1128: 0.0000001 PMRD tae-miR1128: 0.0000001 microPC miR1135: 0.00000004 | UniProt no hits RFAM MIR1122: 0.000000003 |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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