miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



ABOUT THIS RECORD

ID: MNEST045249
species: Liriodendron tulipifera
miRNA family: MIR319
source: microPC, original name: miR319

Taxonomy by NCBI:
Liriodendron tulipifera Liriodendron Magnoliaceae Magnoliales magnoliids Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CTTGGACTGAAGGGAGCTCC

miRNA*
AGCTCTCTTCAGTCCAGTCC

mismatches: 1
bulges: 0

View larger
pre-miRNA
GGAGCTCTCTTCAGTCCAGTCCAAGATAGTATTAAGCCAATCTCCGCTGCTGACTCGTTGGCTCATGAACTCATCCAACGGCTAGGATTCCGATGTGTTT
TTGATCCAACGATGCGGGAGCCGTGTTTGGTTCTGTCTGTCTCGTCTTGGACTGAAGGGAGCTCC


dot-bracket secondary structure
(((((((((((((((((((..(.((((((.((..((((((.(.(.(((.(((..(((((((.(((.((((.((((....((........)))))).))))
.))).)))))))..))).))).).).))))))..)))))))).)..)))))))))))))))))))



SIMILARITIES
miRBase vvi-MIR319b: 0.0000000000001

PMRD ltu-miR319: 2e-90

microPC miR319: 2e-90
UniProt no hits

RFAM MIR159: 0.000000000003

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record





Liczniki na strone;