ABOUT THIS RECORDspecies: Vigna unguiculata
source: microPC, original name: miR160
Taxonomy by NCBI:
Vigna unguiculata Vigna Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GCCTGGCTCCCTGTATGCC miRNA* CGTGCGAGGAGTCATGC mismatches: 2 bulges: 0 |
pre-miRNA
GCCTGGCTCCCTGTATGCCATTTGCAGAGCCCATCAGAACAGTGATGGCTTTAACTAATGGCGTGCGAGGAGTCATGC
dot-bracket secondary structure
((.(((((((.(((((((((((...((((((.((((......))))))))))....))))))))))).))))))).))
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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GCCTGGCTCCCTGTATGCCATTTGCAGAGCCCATCAGAACAGTGATGGCTTTAACTAATGGCGTGCGAGGAGTCATGC
dot-bracket secondary structure
((.(((((((.(((((((((((...((((((.((((......))))))))))....))))))))))).))))))).))
SIMILARITIES| miRBase vvi-MIR160e: 0.000000000004 PMRD vvi-miR160f: 0.000000000004 microPC miR160: 5e-39 | UniProt no hits RFAM mir-160: 0.00000000007 |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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