ABOUT THIS RECORDspecies: Arachis hypogaea
source: microPC, original name: miR156
Taxonomy by NCBI:
Arachis hypogaea Arachis Dalbergieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGACAGAAGAGAGAGAGCAC miRNA* GCTCTCTACTCTTCTGTCA mismatches: 1 bulges: 1 |
pre-miRNA
TGACAGAAGAGAGAGAGCACAACCCGAGAAATGGTCAAAGAATCTTTTACCTTTGTTGGGAGTGTGCTCTCTACTCTTCTGTCA
dot-bracket secondary structure
.((((((((((((((((((((.(((((.(((.(((.((((...)))).)))))).)))))..)))))))))).)))))))))).
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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TGACAGAAGAGAGAGAGCACAACCCGAGAAATGGTCAAAGAATCTTTTACCTTTGTTGGGAGTGTGCTCTCTACTCTTCTGTCA
dot-bracket secondary structure
.((((((((((((((((((((.(((((.(((.(((.((((...)))).)))))).)))))..)))))))))).)))))))))).
SIMILARITIES| miRBase ahy-MIR156c: 2e-42 PMRD ahy-miR157k: 2e-42 microPC miR157: 2e-42 | UniProt no hits RFAM mir-156: 0.000000000001 |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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