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ABOUT THIS RECORD

ID: MNEST045258
species: Saccharum officinarum
source: microPC, original name: miR319

Taxonomy by NCBI:
Saccharum officinarum Saccharum officinarum complex Saccharum Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CTTGGATTGAAGGGAGCTCC

miRNA*
AGCTCCCTTCGATCCAATCC

mismatches: 2
bulges: 0

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pre-miRNA
GAGCTCCCTTCGATCCAATCCAGGAGGGGAAGTGGTCGGTTGCAGCTGCCGGTTCATGGATGCCTCTCTGGTGCAGCAATGACTAATGCTCACCTGCACT
TGCATGGGTGTGCATGACCCGGGAGATGAACCCACCATCATCTTTCCCTCGTGCTTGGATTGAAGGGAGCTCC


dot-bracket secondary structure
((((((((((((((((((..((.(((((((((((((.((((.((.((.((((.(((((.((((((....(((((((...((((....).))).)))))))
.....)))))).))))).)))).)).)))))).))))....))))))))).)).)))))))))))))))))).



SIMILARITIES
miRBase sof-MIR159c: 3e-95

PMRD sof-miR319b: 3e-95

microPC miR319: 3e-95
UniProt no hits

RFAM MIR159: 1e-91

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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