ABOUT THIS RECORDspecies: Glycine max
miRNA family: MIR167
source: microPC, original name: miR167
Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGAAGCTGCCAGCATGATCTA miRNA* GGTCATGCTGTAACAGCCTCA mismatches: 3 bulges: 2 |
pre-miRNA
TGAAGCTGCCAGCATGATCTAGCTTTGGTTAGAGAGCTGAAGAAGAGTGTTAAATGCTAACCCTTACTAGGTCATGCTGTAACAGCCTCA
dot-bracket secondary structure
.((.((((.(((((((((((((....((((((..(((...........))).....))))))....)))))))))))))...)))).)).
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
degradome data
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deep sequencing data evidence
TGAAGCTGCCAGCATGATCTAGCTTTGGTTAGAGAGCTGAAGAAGAGTGTTAAATGCTAACCCTTACTAGGTCATGCTGTAACAGCCTCA
dot-bracket secondary structure
.((.((((.(((((((((((((....((((((..(((...........))).....))))))....)))))))))))))...)))).)).
SIMILARITIES| miRBase gma-MIR167a: 0.0000000000003 PMRD gma-miR167a: 0.0000000000003 microPC miR167: 1e-43 | UniProt no hits RFAM MIR167_1: 0.000000000005 |
MOREmiRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
degradome data
download this record
deep sequencing data evidence
