ABOUT THIS RECORDspecies: Zingiber officinale
source: microPC, original name: miR444
Taxonomy by NCBI:
Zingiber officinale Zingiber Zingiberaceae Zingiberales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGCAATTGTTGCCTCAAGCT miRNA* TATAAGGCAGCAATTGCATA mismatches: 3 bulges: 0 |
pre-miRNA
GTATAAGGCAGCAATTGCATAACTTGTTATGTGCGCTGCCTTAGTTTCTTGCAATTGTTGCCTCAAGCT
dot-bracket secondary structure
((.(.((((((((((((((.((((......(....)......))))...)))))))))))))).).)).
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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GTATAAGGCAGCAATTGCATAACTTGTTATGTGCGCTGCCTTAGTTTCTTGCAATTGTTGCCTCAAGCT
dot-bracket secondary structure
((.(.((((((((((((((.((((......(....)......))))...)))))))))))))).).)).
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record
