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ABOUT THIS RECORD
ID:
MNEST045281
species:
Glycine max
source:
microPC, original name:
miR319
Taxonomy by NCBI:
Glycine max
Glycine
Phaseoleae
Papilionoideae
Fabaceae
Fabales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTTGGATTGAAGGGAGCTC
miRNA*
GCTCCTTGAAGTCCAATTG
mismatches:
3
bulges:
0
View larger
pre-miRNA
GA
GCTCCTTGAAGTCCAATTG
AGGATCTTACTGGGTGAATTGAGCTGCTTAGCTATGGATCCCACAGTTCTACCCATCAATAAGTGCTTTTGTGGTAGTC
TTGTGGCTTCCATATCTGGGGAGCTTCATTTGCCTTTATAGTATTAACCTTC
TTTGGATTGAAGGGAGCTC
dot-bracket secondary structure
((
(((((((..(((((((..(
(((....(((((((..(((.(((((.(((((.((((((..((((((..(((((((..............)).)))))..
))))))..)))))).))))).))))).)))..)))....))))....)))).
.)))))))..)))))))))
SIMILARITIES
miRBase
gma-MIR159a
:
1e-91
PMRD
gma-miR159a
:
1e-91
microPC
miR159
:
4e-94
UniProt
no hits
RFAM
MIR159: 2e-16
Identical with:
miR159
from microPC (
MNEST045395
)
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
degradome data
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