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ABOUT THIS RECORD
ID:
MNEST045295
species:
Phaseolus vulgaris
source:
microPC, original name:
miR319
Taxonomy by NCBI:
Phaseolus vulgaris
Phaseolus
Phaseoleae
Papilionoideae
Fabaceae
Fabales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTGGACTGAAGGGAGCTCCT
miRNA*
GAGCTTCCCTCAGCCCATTC
mismatches:
3
bulges:
0
View larger
pre-miRNA
AG
GAGCTTCCCTCAGCCCATTC
ATGGATACAAAAGATTGGGTTGCAAAATTAACCACTAACTCATTCACACAATAGTATTCAGTTAGGGTGATGCTCTTT
TTGCTATAATATGATTGTGTGAATGAAGTGATGCATACATATTGTGTGACCCTCTTTCTCTGAGC
TTGGACTGAAGGGAGCTCCT
dot-bracket secondary structure
((
((((((((.((((.((((((
(.(((.....((((..((((..(.........((((...(((((((((((((.((((((((..((((.....))))..
)))....))))).)))))))))))))))))..(((.......))))..))))))))))).)))).
.))).)))).))))))))))
SIMILARITIES
miRBase
pvu-MIR319c
:
2e-102
PMRD
pvu-miR319c
:
2e-102
microPC
miR319
:
2e-102
UniProt
no hits
RFAM
MIR159: 0.00000004
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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