miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Back to search results
ABOUT THIS RECORD
ID:
MNEST045311
species:
Carthamus tinctorius
miRNA family:
MIR156
source:
microPC, original name:
miR156
Taxonomy by NCBI:
Carthamus tinctorius
Carthamus
Centaureinae
Cardueae
Carduoideae
Asteraceae
Asterales
campanulids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGACAGAAGAGAGTGAGCACA
miRNA*
TGCTCACTGCTCTATCTGTCA
mismatches:
2
bulges:
2
View larger
pre-miRNA
TGACAGAAGAGAGTGAGCACA
CAAAGGCAAATTATACCCAAGAGTCTTGTATGATTGTTTTGGG
TGCTCACTGCTCTATCTGTCA
dot-bracket secondary structure
.(((((((((((((((((((.
..(((((((.((((((...........)))))))))))))..)
)))))))).)))).)))))).
SIMILARITIES
miRBase
ath-MIR156a
:
0.0000000003
PMRD
ath-miR156a
:
0.0000000003
microPC
miR156
:
4e-43
UniProt
no hits
RFAM
mir-156: 0.000000005
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
download this record