ABOUT THIS RECORDspecies: Oryza sativa
miRNA family: MIR444
source: microPC, original name: miR444
Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGCAGTTGCTGCCTCAAGCTT miRNA* GCATGAGGCAACAACTGCATT mismatches: 2 bulges: 0 |
pre-miRNA
AAGCATGAGGCAACAACTGCATTACTTGCAAGAAAGGCACAAAATCATTAGATGATTACTTGTGGCTTTCTTGCAAGTTGTGCAGTTGCTGCCTCAAGCT
T
dot-bracket secondary structure
((((.(((((((.(((((((((.(((((((((((((.(((((((((((...))))))..))))).))))))))))))).))))))))).))))))).)))
)
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
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AAGCATGAGGCAACAACTGCATTACTTGCAAGAAAGGCACAAAATCATTAGATGATTACTTGTGGCTTTCTTGCAAGTTGTGCAGTTGCTGCCTCAAGCT
T
dot-bracket secondary structure
((((.(((((((.(((((((((.(((((((((((((.(((((((((((...))))))..))))).))))))))))))).))))))))).))))))).)))
)
SIMILARITIES| miRBase osa-MIR444d: 1e-52 PMRD tae-miR444: 0.000000000000005 microPC miR444: 1e-52 | UniProt no hits RFAM MIR444: 7e-21 |
MOREmiRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
download this record
