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ABOUT THIS RECORD
ID:
MNEST045337
species:
Vitis vinifera
source:
microPC, original name:
miR171
Taxonomy by NCBI:
Vitis vinifera
Vitis
Vitaceae
Vitales
rosids incertae sedis
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGATTGAGCCGCGTCAATAT
miRNA*
ATTGGCGTGCCTCAATTTAA
mismatches:
2
bulges:
0
View larger
pre-miRNA
GT
ATTGGCGTGCCTCAATTTAA
AGACATGGTTAGATGAAGAGATATTAGCCATGTGATT
TGATTGAGCCGCGTCAATAT
dot-bracket secondary structure
((
(((((((((.(((((((.((
..((((((((((((......)).))))))))))..))
.))))))).)))))))))))
SIMILARITIES
miRBase
vvi-MIR171b
:
1e-39
PMRD
vvi-miR171b
:
1e-39
microPC
miR171
:
1e-39
UniProt
no hits
RFAM
MIR171_1: 2e-38
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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